STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50425.13-oxoacyl-[acyl-carrier protein] reductase. (258 aa)    
Predicted Functional Partners:
BAJ50426.1
Conserved hypothetical protein; Peptidase dimerisation domain.
  
 
 0.803
BAJ50427.1
Molybdenum hydroxylase family protein, large subunit.
       0.774
BAJ50424.1
Dihydrodipicolinate synthetase.
 
  
 0.725
BAJ50429.1
Orotidine-5'-phosphate decarboxylase.
  
 
 0.707
BAJ50430.1
1-pyrroline-5-carboxylate dehydrogenase.
 
 
 0.667
BAJ51425.1
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A.
  
 
 0.656
BAJ50423.1
2-dehydro-3-deoxygluconokinase.
 
 
 0.640
pyrE
Conserved hypothetical protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.598
BAJ51333.1
NADH dehydrogenase I subunit A.
   
 
 0.553
BAJ51336.1
Hypothetical protein.
   
 
 0.529
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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