Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50567.1Electron transport protein SCO1/SenC. (196 aa)    
Predicted Functional Partners:
BAJ50566.1
Nitrite reductase (NO-forming).
  
  
 0.814
BAJ50062.1
Hypothetical protein.
  
 0.813
BAJ51338.1
Cytochrome c oxidase subunit II.
  
 0.813
BAJ51337.1
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.627
BAJ51358.1
peptidyl-tRNA hydrolase, PTH2 family.
     
 0.549
BAJ50565.1
DNA-binding protein; Bacterio-opsin activator HTH domain protein.
       0.547
BAJ50459.1
Thioredoxin.
  
 
 0.497
BAJ51104.1
Conserved hypothetical protein.
  
 
 0.497
BAJ51517.1
Thioredoxin 1.
  
 
 0.497
BAJ51340.1
Cytochrome AA3 controlling protein.
 
  
 0.495
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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