STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50572.1HTH DNA binding domain protein. (204 aa)    
Predicted Functional Partners:
BAJ50571.1
ABC transporter ATP-binding protein.
       0.626
BAJ50569.1
Hypothetical protein.
       0.625
BAJ50570.1
ABC-2 type transport system permease.
       0.625
BAJ50573.1
Copper-containing oxidoreductase; Nitrite reductase (NO-forming) [EC:1.7.2.1].
       0.548
BAJ50574.1
Blue (type 1) copper domain protein; AhpC/TSA family.
       0.548
BAJ50575.1
Hypothetical protein.
       0.548
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.