BAJ50588.1 protein (Caldiarchaeum subterraneum)

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Score

BAJ50588.1

Deoxyribonuclease V. (207 aa)

Predicted Functional Partners:

pcn

0.723

BAJ51353.1

0.700

BAJ51359.1

0.700

BAJ51595.1

0.700

fen

0.690

nucS

0.590

hel308

0.544

BAJ50589.1

0.477

BAJ50920.1

0.460

BAJ50175.1

0.433

Your Current Organism:

Caldiarchaeum subterraneum

NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAJ50175.1	BAJ50588.1	CSUB_C0314	CSUB_C0730	Endonuclease III.	Deoxyribonuclease V.	0.433
BAJ50175.1	fen	CSUB_C0314	CSUB_C0799	Endonuclease III.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...]	0.751
BAJ50175.1	pcn	CSUB_C0314	CSUB_C1233	Endonuclease III.	Proliferating cell nuclear antigen PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.	0.495
BAJ50588.1	BAJ50175.1	CSUB_C0730	CSUB_C0314	Deoxyribonuclease V.	Endonuclease III.	0.433
BAJ50588.1	BAJ50589.1	CSUB_C0730	CSUB_C0731	Deoxyribonuclease V.	Conserved hypothetical protein; Methyltransferase domain.	0.477
BAJ50588.1	BAJ50920.1	CSUB_C0730	CSUB_C1068	Deoxyribonuclease V.	Dual specificity protein phosphatase.	0.460
BAJ50588.1	BAJ51353.1	CSUB_C0730	CSUB_C1502	Deoxyribonuclease V.	Riboflavin kinase, archaea type.	0.700
BAJ50588.1	BAJ51359.1	CSUB_C0730	CSUB_C1508	Deoxyribonuclease V.	Rhomboid family protein.	0.700
BAJ50588.1	BAJ51595.1	CSUB_C0730	CSUB_C1744	Deoxyribonuclease V.	Hypothetical protein.	0.700
BAJ50588.1	fen	CSUB_C0730	CSUB_C0799	Deoxyribonuclease V.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...]	0.690
BAJ50588.1	hel308	CSUB_C0730	CSUB_C1067	Deoxyribonuclease V.	Helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.	0.544
BAJ50588.1	nucS	CSUB_C0730	CSUB_C1217	Deoxyribonuclease V.	Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.	0.590
BAJ50588.1	pcn	CSUB_C0730	CSUB_C1233	Deoxyribonuclease V.	Proliferating cell nuclear antigen PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.	0.723
BAJ50589.1	BAJ50588.1	CSUB_C0731	CSUB_C0730	Conserved hypothetical protein; Methyltransferase domain.	Deoxyribonuclease V.	0.477
BAJ50589.1	nucS	CSUB_C0731	CSUB_C1217	Conserved hypothetical protein; Methyltransferase domain.	Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.	0.493
BAJ50920.1	BAJ50588.1	CSUB_C1068	CSUB_C0730	Dual specificity protein phosphatase.	Deoxyribonuclease V.	0.460
BAJ50920.1	fen	CSUB_C1068	CSUB_C0799	Dual specificity protein phosphatase.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...]	0.551
BAJ51353.1	BAJ50588.1	CSUB_C1502	CSUB_C0730	Riboflavin kinase, archaea type.	Deoxyribonuclease V.	0.700
BAJ51353.1	BAJ51595.1	CSUB_C1502	CSUB_C1744	Riboflavin kinase, archaea type.	Hypothetical protein.	0.700
BAJ51353.1	hel308	CSUB_C1502	CSUB_C1067	Riboflavin kinase, archaea type.	Helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.	0.426