Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50596.1Conserved hypothetical protein. (341 aa)    
Predicted Functional Partners:
BAJ50597.1
Conserved hypothetical protein.
 
    
0.827
BAJ50037.1
Conserved hypothetical protein.
 
     0.712
BAJ50204.1
Conserved hypothetical protein.
 
     0.641
BAJ50600.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
 
     0.602
BAJ51112.1
Beta-ribofuranosylaminobenzene 5'-phosphate synthase; Catalyzes the condensation of 4-aminobenzoate (pABA) with 5- phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta- ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P).
 
     0.597
BAJ50598.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
       0.547
BAJ50599.1
Pyruvate ferredoxin oxidoreductase, delta subunit.
       0.547
BAJ50601.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
       0.547
rps27ae
Small subunit ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family.
  
     0.491
BAJ51071.1
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
  
     0.451
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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