Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50597.1Conserved hypothetical protein. (299 aa)    
Predicted Functional Partners:
BAJ50596.1
Conserved hypothetical protein.
 
    
0.827
BAJ50037.1
Conserved hypothetical protein.
 
     0.665
BAJ50204.1
Conserved hypothetical protein.
 
     0.605
BAJ50598.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
       0.547
BAJ50599.1
Pyruvate ferredoxin oxidoreductase, delta subunit.
       0.547
BAJ50600.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
       0.547
BAJ50601.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
       0.547
tiaS
Conserved hypothetical protein; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
  
     0.479
BAJ49992.1
Conserved hypothetical protein; Belongs to the UPF0147 family.
  
     0.478
BAJ51071.1
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
  
     0.448
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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