STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (290 aa)    
Predicted Functional Partners:
BAJ51015.1
Cytochrome c oxidase subunit III.
 
 
 0.993
BAJ51337.1
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.992
BAJ51338.1
Cytochrome c oxidase subunit II.
 
 
 0.978
ctaB-2
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
  
 
0.913
BAJ51340.1
Cytochrome AA3 controlling protein.
     
  0.900
BAJ50062.1
Hypothetical protein.
  
  
 0.697
BAJ50616.1
Conserved hypothetical protein.
       0.628
BAJ51360.1
NADH dehydrogenase I subunit B; Belongs to the complex I 20 kDa subunit family.
  
  
 0.623
BAJ51336.1
Hypothetical protein.
 
  
 0.576
BAJ50625.1
Succinate dehydrogenase iron-sulfur protein.
 
  
 0.527
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.