Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50621.1Isocitrate dehydrogenase. (345 aa)    
Predicted Functional Partners:
BAJ50637.1
Aconitate hydratase.
  
 0.984
BAJ50465.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
 
 
 0.938
CSUB_C0812
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; C-terminus of hypothetical conserved protein.
 
  
 0.932
BAJ51485.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 
 0.903
BAJ51486.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.901
BAJ50254.1
Aspartate aminotransferase.
 
 
 0.890
BAJ50546.1
Dimethylmenaquinone methyltransferase.
      0.885
BAJ50512.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.878
argH
Argininosuccinate lyase.
  
 
 0.868
BAJ50194.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.851
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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