STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50650.1Conserved hypothetical protein. (82 aa)    
Predicted Functional Partners:
BAJ50651.1
Pyruvate dehydrogenase E1 component subunit beta.
  
 0.927
BAJ51441.1
2-oxoisovalerate dehydrogenase E1 component, beta subunit.
  
 0.927
BAJ50835.1
Mercuric reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.925
BAJ51440.1
Dihydrolipoamide dehydrogenase.
  
 0.925
BAJ50923.1
Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
  
 0.842
sucC
succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.831
BAJ50652.1
Pyruvate dehydrogenase E1 component subunit alpha.
 
 0.829
BAJ50745.1
Citrate synthase.
  
 0.796
BAJ51498.1
Citrate synthase.
  
 0.796
BAJ50112.1
Pyruvate dehydrogenase E1 component subunit alpha.
  
 0.792
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.