STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50665.1ABC-2 type transport system permease. (414 aa)    
Predicted Functional Partners:
BAJ50666.1
ABC transporter ATP-binding protein.
 
  
 0.949
BAJ50490.1
Antibiotic ABC transporter ATP-binding protein.
 
  
 0.729
BAJ50571.1
ABC transporter ATP-binding protein.
 
  
 0.709
BAJ51580.1
ABC transporter ATP-binding protein.
 
  
 0.684
BAJ49982.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.663
BAJ49981.1
ABC-2 type transport system permease.
 
 
 0.618
BAJ51581.1
ABC-2 type transport system protein.
  
  
  0.590
BAJ50315.1
Conserved hypothetical protein; CAAX amino terminal protease family.
  
  
 0.588
BAJ50252.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.579
BAJ50668.1
DNA polymerase beta subunit.
       0.564
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.