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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50679.1FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (397 aa)    
Predicted Functional Partners:
BAJ50875.1
Nickel-dependent hydrogenase large subunit.
    
 0.921
BAJ50636.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.915
BAJ51573.1
Cysteine synthase A.
    
 0.915
BAJ50871.1
4Fe-4S ferredoxin, iron-sulfur binding protein.
    
 0.908
BAJ50681.1
Conserved hypothetical protein.
 
     0.822
BAJ50680.1
Conserved hypothetical protein; SirA family protein.
     
 0.811
BAJ50678.1
Transcriptional regulator, ArsR family.
       0.788
BAJ50274.1
glycine/D-amino acid oxidase (deaminating).
  
 
 0.725
BAJ50361.1
FAD dependent oxidoreductase.
  
 
 0.725
BAJ50911.1
Beta-lactamase domain protein.
   
 0.672
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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