Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ50689.1DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. (187 aa)    
Predicted Functional Partners:
BAJ50690.1
DNA polymerase bacteriophage-type.
     
 0.964
BAJ50705.1
Zinc-dependent protease, TldD/PmbA family.
       0.700
BAJ51070.1
Elongator complex protein 3.
    
   0.694
BAJ50691.1
Peroxiredoxin Q/BCP.
  
    0.581
BAJ50059.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
     
 0.426
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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