STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50732.1Simple sugar transporter permease. (336 aa)    
Predicted Functional Partners:
BAJ50733.1
ABC transporter permease.
 
0.991
BAJ50734.1
Basic membrane protein A.
 
 
 0.986
BAJ50388.1
Sugar ABC transporter ATP-binding protein.
 
 0.956
BAJ50743.1
Simple sugar ABC transporter ATP-binding protein.
 
 0.956
BAJ51560.1
Simple sugar transporter ATP-binding protein.
 
 0.954
BAJ51559.1
Simple sugar transporter permease.
 
0.952
BAJ50389.1
Sugar ABC transporter permease.
 
0.949
BAJ50393.1
Sugar ABC transporter ATP-binding protein.
 
 0.938
BAJ50392.1
Basic membrane lipoprotein.
 
 
 0.931
BAJ50391.1
Conserved hypothetical protein.
 
 
 0.929
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.