STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50812.1Hypothetical protein. (508 aa)    
Predicted Functional Partners:
BAJ50813.1
Conserved hypothetical protein.
       0.773
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
 
     0.716
BAJ50810.1
Hypothetical protein.
       0.649
BAJ50811.1
Hypothetical protein.
       0.648
BAJ50814.1
Hypothetical protein.
       0.645
BAJ50815.1
Hypothetical protein.
       0.575
BAJ50816.1
Hypothetical protein.
       0.575
BAJ50809.1
Hypothetical protein.
       0.561
BAJ50808.1
Probable transcription initiation factor IIB.
       0.457
BAJ50056.1
DNA topoisomerase III.
 
     0.455
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.