STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50828.1Conserved hypothetical protein; ATP binding protein. (226 aa)    
Predicted Functional Partners:
BAJ50168.1
Hypothetical protein.
       0.700
fusA
Elongation factor EF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
    
 0.677
BAJ50826.1
DNA polymerase beta subunit.
       0.520
BAJ50827.1
HEPN domain-containing protein.
       0.520
BAJ50829.1
Conserved hypothetical protein; Cytoplasmic chaperone TorD family protein.
       0.499
BAJ50830.1
Molybdopterin oxidoreductase subunit.
       0.476
BAJ50831.1
Molybdopterin oxidoreductase Fe-S binding subunit; Similar to nitrate reductase beta chain NarH.
       0.470
BAJ50832.1
Molybdopterin oxidoreductase molybdopterin binding subunit, C-terminal.
       0.470
BAJ50833.1
Molybdopterin oxidoreductase molybdopterin binding subunit, N-terminal.
       0.458
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.