STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50876.1Hydrogenase maturation protease. (160 aa)    
Predicted Functional Partners:
BAJ50875.1
Nickel-dependent hydrogenase large subunit.
 
 
 0.976
BAJ50874.1
NADH ubiquinone oxidoreductase 20 kDa subunit.
 
  
 0.959
BAJ50871.1
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
     0.922
BAJ50869.1
Hydrogenase nickel incorporation protein HypA.
  
  
 0.915
BAJ50873.1
Oxidoreductase FAD/NAD(P)-binding subunit.
 
    0.873
BAJ50872.1
Transcriptional regulator, Crp/Fnr family.
 
     0.868
BAJ50879.1
Hydrogenase expression/formation protein HypC.
  
  
 0.838
BAJ50878.1
Hydrogenase expression/formation protein HypD.
     
 0.806
BAJ50870.1
ATP-binding protein involved in chromosome partitioning.
       0.718
BAJ51057.1
Fe-S oxidoreductase.
 
   
 0.548
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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