Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50893.1Protein phosphatase. (263 aa)    
Predicted Functional Partners:
BAJ51424.1
Conserved hypothetical protein; GTPase.
  
 0.956
BAJ49902.1
Hypothetical protein.
  
 0.926
BAJ50980.1
Conserved hypothetical protein.
   
 0.826
BAJ51091.1
Beta-lactamase domain protein; Putative mRNA 3-end processing factor.
  
 0.826
BAJ50166.1
Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
 
  0.816
BAJ50818.1
1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase.
  
 0.811
BAJ51072.1
Conserved hypothetical protein.
  
 0.811
BAJ51403.1
Translation initiation factor eIF-2 alpha subunit.
   
 
 0.803
sucC
succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
   0.799
BAJ51324.1
26S proteasome regulatory subunit N11-like protein.
  
  0.786
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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