Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAJ50890.1 | BAJ50893.1 | CSUB_C1038 | CSUB_C1041 | ATP-binding protein. | Protein phosphatase. | 0.558 |
BAJ50890.1 | BAJ50894.1 | CSUB_C1038 | CSUB_C1042 | ATP-binding protein. | Metallo-beta-lactamase protein. | 0.557 |
BAJ50890.1 | BAJ50895.1 | CSUB_C1038 | CSUB_C1043 | ATP-binding protein. | Malate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.517 |
BAJ50890.1 | BAJ50896.1 | CSUB_C1038 | CSUB_C1044 | ATP-binding protein. | Conserved hypothetical protein. | 0.437 |
BAJ50890.1 | BAJ50897.1 | CSUB_C1038 | CSUB_C1045 | ATP-binding protein. | Peptidase M20. | 0.439 |
BAJ50890.1 | BAJ50898.1 | CSUB_C1038 | CSUB_C1046 | ATP-binding protein. | Conserved hypothetical protein. | 0.437 |
BAJ50890.1 | sucC | CSUB_C1038 | CSUB_C1039 | ATP-binding protein. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.557 |
BAJ50890.1 | sucD | CSUB_C1038 | CSUB_C1040 | ATP-binding protein. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.557 |
BAJ50893.1 | BAJ50890.1 | CSUB_C1041 | CSUB_C1038 | Protein phosphatase. | ATP-binding protein. | 0.558 |
BAJ50893.1 | BAJ50894.1 | CSUB_C1041 | CSUB_C1042 | Protein phosphatase. | Metallo-beta-lactamase protein. | 0.773 |
BAJ50893.1 | BAJ50895.1 | CSUB_C1041 | CSUB_C1043 | Protein phosphatase. | Malate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.682 |
BAJ50893.1 | BAJ50896.1 | CSUB_C1041 | CSUB_C1044 | Protein phosphatase. | Conserved hypothetical protein. | 0.592 |
BAJ50893.1 | BAJ50897.1 | CSUB_C1041 | CSUB_C1045 | Protein phosphatase. | Peptidase M20. | 0.634 |
BAJ50893.1 | BAJ50898.1 | CSUB_C1041 | CSUB_C1046 | Protein phosphatase. | Conserved hypothetical protein. | 0.641 |
BAJ50893.1 | sucC | CSUB_C1041 | CSUB_C1039 | Protein phosphatase. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.798 |
BAJ50893.1 | sucD | CSUB_C1041 | CSUB_C1040 | Protein phosphatase. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.782 |
BAJ50894.1 | BAJ50890.1 | CSUB_C1042 | CSUB_C1038 | Metallo-beta-lactamase protein. | ATP-binding protein. | 0.557 |
BAJ50894.1 | BAJ50893.1 | CSUB_C1042 | CSUB_C1041 | Metallo-beta-lactamase protein. | Protein phosphatase. | 0.773 |
BAJ50894.1 | BAJ50895.1 | CSUB_C1042 | CSUB_C1043 | Metallo-beta-lactamase protein. | Malate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.672 |
BAJ50894.1 | BAJ50896.1 | CSUB_C1042 | CSUB_C1044 | Metallo-beta-lactamase protein. | Conserved hypothetical protein. | 0.592 |
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