Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
BAJ50899.1Saccharopine dehydrogenase (NAD+, L-lysine forming). (390 aa)    
Predicted Functional Partners:
BAJ50900.1
Conserved hypothetical protein; Similar to succinyl-diaminopimelate desuccinylase [EC:3.5.1.18].
     
 0.736
BAJ51364.1
Agmatinase; Belongs to the arginase family.
   
 0.725
BAJ50901.1
Glutamate-1-semialdehyde-2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.724
BAJ50903.1
Spermidine/putrescine ABC transporter permease.
       0.627
BAJ50904.1
Spermidine/putrescine ABC transporter permease.
       0.604
BAJ50902.1
Spermidine/putrescine ABC transporter ATP-binding protein.
       0.578
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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