STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50903.1Spermidine/putrescine ABC transporter permease. (286 aa)    
Predicted Functional Partners:
BAJ50904.1
Spermidine/putrescine ABC transporter permease.
  
0.999
BAJ50905.1
Spermidine/putrescine ABC transporter substrate-binding protein.
  
 0.998
BAJ50902.1
Spermidine/putrescine ABC transporter ATP-binding protein.
  
 0.937
BAJ50901.1
Glutamate-1-semialdehyde-2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.668
BAJ50899.1
Saccharopine dehydrogenase (NAD+, L-lysine forming).
       0.631
BAJ50900.1
Conserved hypothetical protein; Similar to succinyl-diaminopimelate desuccinylase [EC:3.5.1.18].
       0.616
BAJ51183.1
Heat shock protein DnaJ-like.
     
 0.585
BAJ50064.1
ABC transporter ATP-binding protein.
  
 0.507
BAJ51364.1
Agmatinase; Belongs to the arginase family.
     
 0.447
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.