Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50916.1Conserved hypothetical protein. (330 aa)    
Predicted Functional Partners:
BAJ50915.1
Threonine synthase.
       0.773
BAJ51058.1
Electron transfer flavoprotein beta subunit.
  
 
 0.700
BAJ51284.1
Electron transfer flavoprotein-quinone oxidoreductase.
  
 
 0.666
BAJ50917.1
Hypothetical protein.
       0.533
BAJ50918.1
Replicative DNA helicase Mcm; Belongs to the MCM family.
       0.533
BAJ50443.1
Phytoene synthase.
  
  
 0.433
hel308
Helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.
  
    0.427
BAJ50034.1
4-hydroxybenzoate octaprenyltransferase.
  
  
 0.410
BAJ50207.1
4-hydroxybenzoate octaprenyltransferase.
  
  
 0.410
BAJ51059.1
Electron transfer flavoprotein alpha subunit.
  
 
 0.401
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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