Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ50917.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
BAJ50942.1
Conserved hypothetical protein.
   
 
 0.884
BAJ50918.1
Replicative DNA helicase Mcm; Belongs to the MCM family.
     
 0.861
hel308
Helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.
       0.819
BAJ49872.1
Replication factor C small subunit.
       0.700
BAJ49886.1
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase.
       0.700
BAJ50366.1
Translation initiation factor eIF-2 beta subunit.
       0.700
rfcL
Replication factor C large subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily.
       0.676
BAJ50382.1
propionyl-CoA carboxylase beta chain.
       0.545
BAJ50915.1
Threonine synthase.
       0.533
BAJ50916.1
Conserved hypothetical protein.
       0.533
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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