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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50929.12'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (183 aa)    
Predicted Functional Partners:
cca
tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
 
   
 0.893
BAJ50931.1
Serine/threonine protein kinase.
       0.855
BAJ50926.1
Conserved hypothetical protein; Belongs to the UPF0201 family.
       0.813
BAJ50928.1
dTMP kinase.
       0.773
BAJ50933.1
Glucokinase.
       0.718
BAJ50932.1
Glycolate oxidase.
       0.706
BAJ51223.1
Conserved hypothetical protein.
       0.683
BAJ50367.1
Conserved hypothetical protein.
       0.680
BAJ50934.1
Transcriptional regulator, AsnC family.
       0.595
BAJ50225.1
Phosphoribosyltransferase.
       0.557
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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