STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmBProteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (220 aa)    
Predicted Functional Partners:
psmB-3
Proteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
  
 
0.906
psmB-2
20S proteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
  
 
0.905
BAJ50955.1
Beta-lactamase domain protein.
     
 0.850
BAJ51426.1
Proteasome alpha subunit.
 
 
0.803
BAJ51000.1
20S proteasome alpha subunit.
 
 
0.800
BAJ51324.1
26S proteasome regulatory subunit N11-like protein.
  
 0.714
BAJ50939.1
Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.690
BAJ50562.1
Conserved hypothetical protein; Mov34/MPN/PAD-1 family protein.
   
 0.665
BAJ51275.1
Metal-dependent protease, PAD1/JA B1 superfamily.
   
 0.665
BAJ50956.1
Small nuclear ribonucleoprotein.
  
    0.650
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.