Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rpl37eLarge subunit ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (55 aa)    
Predicted Functional Partners:
BAJ50939.1
Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 0.992
rpl21e
Large subunit ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
  
 0.989
rpl7ae
Large subunit ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
  
 0.989
rpl24
Large subunit ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit.
  
 0.989
BAJ50336.1
Large subunit ribosomal protein L32e.
 
 0.989
rpl31e
Large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family.
   
 0.989
BAJ50950.1
Large subunit ribosomal protein L30e.
  
 0.989
rpl24e
Large subunit ribosomal protein L24e; Binds to the 23S rRNA.
  
 0.987
rpl22
Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
  
 0.987
rpl29
Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
 0.987
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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