STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50961.1Glycosyl transferase family 2. (642 aa)    
Predicted Functional Partners:
BAJ50960.1
Hypothetical protein.
      
0.789
BAJ50536.1
Creatinine amidohydrolase.
  
  
 0.746
BAJ50963.1
Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase.
 
   
 0.671
BAJ50126.1
UDP-glucose 6-dehydrogenase.
  
  
 0.583
BAJ50962.1
Hypothetical protein.
       0.547
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.546
BAJ51182.1
Dolichol-phosphate mannosyltransferase.
 
 
 0.520
CSUB_C0034
ATPase; Probable gene remnant of transposase.
  
  
 0.492
BAJ50465.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
  
  
 0.465
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.448
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.