STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50963.1Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase. (459 aa)    
Predicted Functional Partners:
BAJ50962.1
Hypothetical protein.
       0.774
BAJ50033.1
Conserved hypothetical protein.
  
  
 0.711
BAJ50992.1
Conserved hypothetical protein.
  
  
 0.711
BAJ51138.1
Hypothetical protein.
  
  
 0.711
BAJ51572.1
Conserved hypothetical protein.
  
  
 0.711
BAJ50961.1
Glycosyl transferase family 2.
 
   
 0.671
BAJ50960.1
Hypothetical protein.
       0.547
BAJ50443.1
Phytoene synthase.
 
  
 0.514
BAJ51200.1
Dehydrogenase (flavoprotein)-like protein.
 
  
 0.499
BAJ50207.1
4-hydroxybenzoate octaprenyltransferase.
 
  
 0.490
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.