STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51042.1FdhD/NarQ family/nitrate assimilation protein. (258 aa)    
Predicted Functional Partners:
BAJ51048.1
Formate dehydrogenase alpha subunit.
 
  
 0.801
BAJ49928.1
Molybdenum cofactor biosynthesis protein A.
  
  
 0.795
BAJ51458.1
Molybdenum cofactor biosynthesis protein C.
  
  
 0.744
BAJ51044.1
Molybdopterin biosynthesis protein MoeA.
 
   
 0.721
BAJ51043.1
Molybdopterin biosynthesis protein MoeA.
 
   
 0.710
BAJ50028.1
Molybdopterin-guanine dinucleotide biosynthesis protein B.
 
  
 0.680
BAJ51047.1
Formate dehydrogenase formation protein FdhE.
 
  
 0.616
BAJ50027.1
Conserved hypothetical protein.
 
 
 
 0.604
BAJ51041.1
ATPase.
  
    0.563
BAJ51453.1
Molybdenum cofactor biosynthesis protein E.
  
  
 0.558
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.