Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ51054.1Deoxyribodipyrimidine photo-lyase. (457 aa)    
Predicted Functional Partners:
BAJ50172.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.730
BAJ50443.1
Phytoene synthase.
 
   
 0.540
BAJ50932.1
Glycolate oxidase.
  
 
 0.522
BAJ50987.1
Molybdopterin biosynthesis protein MoeB.
   
   0.482
BAJ51348.1
Acetoin utilization protein AcuC; Histone deacetylase superfamily protein.
  
 
 0.447
BAJ50059.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
     
 0.414
BAJ51425.1
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A.
     
 0.402
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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