STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51055.1GCN5-related N-acetyltransferase. (155 aa)    
Predicted Functional Partners:
BAJ51056.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
   
   0.858
BAJ51061.1
Hydrogenase expression/formation protein HypE.
 
     0.628
BAJ51057.1
Fe-S oxidoreductase.
       0.553
BAJ51058.1
Electron transfer flavoprotein beta subunit.
       0.526
BAJ51059.1
Electron transfer flavoprotein alpha subunit.
       0.526
BAJ51060.1
Hypothetical protein.
       0.526
BAJ51062.1
Nitroreductase.
       0.467
BAJ51391.1
Mannose-6-phosphate isomerase / glucose-6-phosphate isomerase.
 
  
 0.463
BAJ50445.1
Conserved hypothetical protein; Adenosine specific kinase.
  
     0.450
BAJ50993.1
Phosphate uptake regulator.
 
    0.405
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.