Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ51057.1Fe-S oxidoreductase. (669 aa)    
Predicted Functional Partners:
BAJ51222.1
Conserved hypothetical protein.
 
 
 0.971
BAJ51058.1
Electron transfer flavoprotein beta subunit.
 
  
 0.905
BAJ51059.1
Electron transfer flavoprotein alpha subunit.
 
  
 0.859
BAJ51061.1
Hydrogenase expression/formation protein HypE.
     
 0.801
BAJ51060.1
Hypothetical protein.
     
 0.786
BAJ50932.1
Glycolate oxidase.
  
  
 0.649
gap
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.640
BAJ51062.1
Nitroreductase.
       0.626
BAJ51056.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
     
 0.599
BAJ50873.1
Oxidoreductase FAD/NAD(P)-binding subunit.
  
  
 0.583
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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