Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ51060.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
BAJ51057.1
Fe-S oxidoreductase.
     
 0.786
BAJ51058.1
Electron transfer flavoprotein beta subunit.
       0.773
BAJ51059.1
Electron transfer flavoprotein alpha subunit.
       0.773
BAJ51061.1
Hydrogenase expression/formation protein HypE.
       0.773
BAJ50028.1
Molybdopterin-guanine dinucleotide biosynthesis protein B.
  
 
 0.716
BAJ51062.1
Nitroreductase.
       0.648
BAJ49932.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
  
 0.553
BAJ50601.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
  
 0.553
BAJ51485.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
  
 0.553
BAJ51056.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
       0.526
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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