STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51081.1FMN-dependent monooxygenase. (331 aa)    
Predicted Functional Partners:
BAJ51080.1
Thioesterase superfamily protein.
       0.773
BAJ51088.1
LPPG:Fo 2-phospho-L-lactate transferase.
 
   
 0.658
BAJ51082.1
Pyruvate phosphate dikinase.
       0.655
BAJ51446.1
F420-0:gamma-glutamyl ligase.
 
   
 0.637
BAJ51089.1
Hypothetical protein.
 
   
 0.572
BAJ51079.1
Metallophosphoesterase.
       0.563
BAJ51217.1
Sulfonate/nitrate/taurine ABC transporter permease.
 
  
 0.490
BAJ51078.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.480
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.