STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51088.1LPPG:Fo 2-phospho-L-lactate transferase. (310 aa)    
Predicted Functional Partners:
BAJ51089.1
Hypothetical protein.
 
  
 0.997
BAJ51446.1
F420-0:gamma-glutamyl ligase.
 
 
 0.993
BAJ51087.1
Nitroreductase.
 
  
 0.864
BAJ50228.1
NADPH-dependent F420 reductase.
 
   
 0.764
BAJ51081.1
FMN-dependent monooxygenase.
 
   
 0.658
BAJ50238.1
Coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
 
   
 0.590
BAJ51071.1
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
 
   
 0.589
BAJ50304.1
Nucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
     
 0.573
BAJ51086.1
Hypothetical protein.
       0.565
BAJ50247.1
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
 
   
 0.559
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.