STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51088.1LPPG:Fo 2-phospho-L-lactate transferase. (310 aa)    
Predicted Functional Partners:
BAJ51089.1
Hypothetical protein.
 
  
 0.998
BAJ51446.1
F420-0:gamma-glutamyl ligase.
 
 
 0.997
BAJ51087.1
Nitroreductase.
 
  
 0.862
BAJ51512.1
Glycosyltransferase family 28.
  
    0.762
BAJ50228.1
NADPH-dependent F420 reductase.
 
   
 0.717
BAJ49986.1
Metal-dependent phosphohydrolase.
       0.700
BAJ50037.1
Conserved hypothetical protein.
       0.700
BAJ51113.1
Hypothetical protein.
       0.700
BAJ51081.1
FMN-dependent monooxygenase.
 
   
 0.661
BAJ50238.1
Coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
 
   
 0.594
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.