Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51104.1Conserved hypothetical protein. (214 aa)    
Predicted Functional Partners:
BAJ51230.1
Thioredoxin reductase (NADPH).
 
 
 0.948
BAJ50322.1
Thioredoxin reductase (NADPH).
 
 
 0.932
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
  
 0.814
BAJ50835.1
Mercuric reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.767
BAJ51440.1
Dihydrolipoamide dehydrogenase.
  
 0.767
BAJ51183.1
Heat shock protein DnaJ-like.
   
 0.763
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
     
 0.737
BAJ51517.1
Thioredoxin 1.
    
 0.726
BAJ51102.1
Hypothetical protein.
       0.721
BAJ51105.1
Aminotransferase.
     
 0.700
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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