Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tgtAQueuine tRNA-ribosyltransferas; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. (519 aa)    
Predicted Functional Partners:
BAJ50013.1
RNA binding PUA domain protein.
     0.950
BAJ50346.1
Conserved hypothetical protein.
  
  
 0.767
BAJ50683.1
Nuclear ribonucleoprotein.
       0.700
BAJ50197.1
histidyl-tRNA synthetase.
 
  
 0.669
nusA
N utilization substance protein A; Participates in transcription termination. Belongs to the NusA family.
 
    0.661
BAJ51532.1
6-pyruvoyl tetrahydrobiopterin synthase.
 
 
 
 0.638
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
  
 0.636
BAJ51533.1
Transcription regulator ExsB related protein.
 
   
 0.627
BAJ50996.1
Conserved hypothetical protein; N6-adenine-specific DNA methylase.
  
  
 0.605
BAJ51165.1
Conserved hypothetical protein.
 
     0.605
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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