STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51200.1Dehydrogenase (flavoprotein)-like protein. (460 aa)    
Predicted Functional Partners:
BAJ50207.1
4-hydroxybenzoate octaprenyltransferase.
 
 
 0.968
BAJ51461.1
Geranylgeranyl reductase.
  
  
 
0.922
carS
Conserved hypothetical protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
     
 0.908
BAJ51058.1
Electron transfer flavoprotein beta subunit.
  
 
 0.765
BAJ51284.1
Electron transfer flavoprotein-quinone oxidoreductase.
 
 
 0.751
BAJ50443.1
Phytoene synthase.
 
  
 0.610
BAJ50034.1
4-hydroxybenzoate octaprenyltransferase.
 
  
 0.581
BAJ51201.1
Pyruvate dehydrogenase E1 component subunit alpha.
       0.542
BAJ51059.1
Electron transfer flavoprotein alpha subunit.
  
 
 0.513
BAJ51282.1
Electron transfer flavoprotein beta subunit.
  
 
 0.513
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.