Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ51218.1Conserved hypothetical protein. (135 aa)    
Predicted Functional Partners:
BAJ49976.1
Glutamine synthetase.
       0.700
atpD
V-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.700
BAJ50141.1
pre-mRNA processing ribonucleoprotein, binding region.
       0.700
flpA
Fibrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.
       0.700
BAJ50145.1
tRNA (guanine-N2-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
       0.700
BAJ51219.1
Hypothetical protein.
       0.557
BAJ51220.1
Translation initiation inhibitor.
       0.476
BAJ51149.1
V-type H+-transporting ATPase subunit F.
       0.475
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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