Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ51224.1Conserved hypothetical protein. (485 aa)    
Predicted Functional Partners:
CSUB_C0034
ATPase; Probable gene remnant of transposase.
  
 
 0.755
BAJ50536.1
Creatinine amidohydrolase.
  
  
 0.739
BAJ50126.1
UDP-glucose 6-dehydrogenase.
  
  
 0.567
BAJ51225.1
Dimethyladenosine rRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
    0.515
BAJ51226.1
Hypothetical protein.
       0.483
BAJ51182.1
Dolichol-phosphate mannosyltransferase.
 
 
 0.481
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.480
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
 
 0.474
BAJ50465.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
  
  
 0.460
BAJ50653.1
UDP-glucose 4-epimerase.
 
 
 0.441
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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