Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ51296.1Hypothetical protein. (496 aa)    
Predicted Functional Partners:
BAJ51298.1
Archaeal flagellar protein FlaH.
  
  
 0.989
BAJ51297.1
Archaeal flagellar protein FlaI.
  
  
 0.979
BAJ51299.1
Hypothetical protein.
  
  
 0.948
BAJ51300.1
Conserved hypothetical protein; Archaeal flagellar protein FlaG.
  
  
 0.948
BAJ51302.1
Archaeal flagellin FlaB.
  
  
 0.948
BAJ51172.1
Type II secretion system protein E.
  
  
 0.903
BAJ51301.1
Hypothetical protein.
       0.860
BAJ51295.1
Similar to flagella-related protein J.
       0.773
BAJ51293.1
Ferredoxin-dependent glutamate synthase.
       0.762
BAJ51294.1
asparaginyl-tRNA synthetase.
       0.762
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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