Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ51324.126S proteasome regulatory subunit N11-like protein. (202 aa)    
Predicted Functional Partners:
BAJ51325.1
Ubiquitin-like protein.
   
 
 0.980
BAJ50366.1
Translation initiation factor eIF-2 beta subunit.
 
 0.866
BAJ51326.1
Ubiquitin-conjugating enzyme E2-like protein.
 
     0.851
BAJ51403.1
Translation initiation factor eIF-2 alpha subunit.
   
 0.845
rps15
Small subunit ribosomal protein S15.
 
 0.840
BAJ51327.1
Ubiquitin-activating enzyme E1-like protein.
 
 
 0.840
rps4e
Small subunit ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.
  
  0.826
BAJ51000.1
20S proteasome alpha subunit.
  
 0.826
BAJ51426.1
Proteasome alpha subunit.
  
 0.824
rpl19e
Large subunit ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.
  
  0.805
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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