STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51327.1Ubiquitin-activating enzyme E1-like protein. (394 aa)    
Predicted Functional Partners:
BAJ51453.1
Molybdenum cofactor biosynthesis protein E.
 
 0.971
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).
 
  
 0.923
BAJ50939.1
Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.921
BAJ51324.1
26S proteasome regulatory subunit N11-like protein.
 
 
 0.856
BAJ51326.1
Ubiquitin-conjugating enzyme E2-like protein.
 
     0.832
BAJ49928.1
Molybdenum cofactor biosynthesis protein A.
 
  
 0.787
BAJ50069.1
Pyrroloquinoline-quinone synthase.
  
  
 0.780
BAJ51325.1
Ubiquitin-like protein.
       0.774
cca
tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
  
 
 0.773
BAJ51328.1
Hypothetical protein; Zinc finger (C3HC4-type RING finger) family protein.
       0.773
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.