Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51344.1Conserved hypothetical protein. (184 aa)    
Predicted Functional Partners:
BAJ51345.1
Conserved hypothetical protein; ThiW (Thiamine-precursor transporter).
       0.860
BAJ51341.1
Luciferase family protein.
       0.762
BAJ51342.1
Phosphomethylpyrimidine kinase.
       0.762
BAJ51343.1
Conserved hypothetical protein.
       0.762
BAJ51337.1
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
       0.680
BAJ51338.1
Cytochrome c oxidase subunit II.
       0.680
BAJ51339.1
Conserved hypothetical protein.
       0.680
BAJ51340.1
Cytochrome AA3 controlling protein.
       0.680
dbh
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis.
       0.454
BAJ51346.1
Conserved hypothetical protein.
       0.453
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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