Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51359.1Rhomboid family protein. (227 aa)    
Predicted Functional Partners:
BAJ51474.1
Membrane protease subunit.
  
 0.755
BAJ51358.1
peptidyl-tRNA hydrolase, PTH2 family.
       0.752
BAJ51390.1
5-formyltetrahydrofolate cyclo-ligase.
  
  
 0.739
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)]; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
  
    0.730
BAJ51406.1
Peptidase M50.
  
  
 0.710
BAJ50588.1
Deoxyribonuclease V.
       0.700
BAJ50317.1
Sec-independent protein translocase protein TatA.
  
 
 0.629
BAJ51599.1
Sec-independent protein translocase protein TatA.
  
 
 0.629
BAJ51357.1
Conserved hypothetical protein.
       0.577
BAJ51361.1
NADH dehydrogenase I subunit C.
  
  
 0.504
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.