BAJ51380.1 protein (Caldiarchaeum subterraneum)

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Score

BAJ51380.1

Conserved hypothetical protein. (151 aa)

Predicted Functional Partners:

BAJ50184.1

0.545

BAJ50166.1

0.537

rps7

0.532

rps4

0.529

rps13

0.527

BAJ50181.1

0.517

BAJ50180.1

0.515

rpl7ae

0.509

rps15

0.507

rpl6

0.506

Your Current Organism:

Caldiarchaeum subterraneum

NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAJ50166.1	BAJ50180.1	CSUB_C0305	CSUB_C0319	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L13.	0.996
BAJ50166.1	BAJ50181.1	CSUB_C0305	CSUB_C0320	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S9.	0.993
BAJ50166.1	BAJ50184.1	CSUB_C0305	CSUB_C0323	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.995
BAJ50166.1	BAJ51380.1	CSUB_C0305	CSUB_C1529	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Conserved hypothetical protein.	0.537
BAJ50166.1	rpl6	CSUB_C0305	CSUB_C0474	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.998
BAJ50166.1	rpl7ae	CSUB_C0305	CSUB_C0428	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.998
BAJ50166.1	rps13	CSUB_C0305	CSUB_C0458	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.995
BAJ50166.1	rps15	CSUB_C0305	CSUB_C0444	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S15.	0.995
BAJ50166.1	rps4	CSUB_C0305	CSUB_C1609	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.991
BAJ50166.1	rps7	CSUB_C0305	CSUB_C1705	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.995
BAJ50180.1	BAJ50166.1	CSUB_C0319	CSUB_C0305	Large subunit ribosomal protein L13.	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.996
BAJ50180.1	BAJ50181.1	CSUB_C0319	CSUB_C0320	Large subunit ribosomal protein L13.	Small subunit ribosomal protein S9.	0.999
BAJ50180.1	BAJ50184.1	CSUB_C0319	CSUB_C0323	Large subunit ribosomal protein L13.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.998
BAJ50180.1	BAJ51380.1	CSUB_C0319	CSUB_C1529	Large subunit ribosomal protein L13.	Conserved hypothetical protein.	0.515
BAJ50180.1	rpl6	CSUB_C0319	CSUB_C0474	Large subunit ribosomal protein L13.	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.995
BAJ50180.1	rpl7ae	CSUB_C0319	CSUB_C0428	Large subunit ribosomal protein L13.	Large subunit ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.993
BAJ50180.1	rps13	CSUB_C0319	CSUB_C0458	Large subunit ribosomal protein L13.	Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.997
BAJ50180.1	rps15	CSUB_C0319	CSUB_C0444	Large subunit ribosomal protein L13.	Small subunit ribosomal protein S15.	0.992
BAJ50180.1	rps4	CSUB_C0319	CSUB_C1609	Large subunit ribosomal protein L13.	Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.997
BAJ50180.1	rps7	CSUB_C0319	CSUB_C1705	Large subunit ribosomal protein L13.	Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.992