Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ51388.1Conserved hypothetical protein. (249 aa)    
Predicted Functional Partners:
BAJ51387.1
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
 
    0.871
BAJ50013.1
RNA binding PUA domain protein.
 
     0.775
BAJ51389.1
acetyl-CoA synthetase.
  
    0.619
BAJ50926.1
Conserved hypothetical protein; Belongs to the UPF0201 family.
  
     0.585
rps3ae
Small subunit ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
 
     0.549
BAJ51588.1
Transcriptional regulator.
  
   
 0.549
BAJ51390.1
5-formyltetrahydrofolate cyclo-ligase.
       0.548
BAJ51385.1
Hypothetical protein.
       0.547
BAJ51386.1
Hypothetical protein.
       0.547
BAJ50402.1
Conserved hypothetical protein.
  
     0.536
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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