STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ51392.1Competence/damage-inducible protein CinA. (264 aa)    
Predicted Functional Partners:
BAJ50693.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.777
BAJ51393.1
Conserved hypothetical protein; Calcineurin-like phosphoesterase domain.
       0.773
BAJ51395.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
  
    0.761
BAJ51391.1
Mannose-6-phosphate isomerase / glucose-6-phosphate isomerase.
  
    0.730
BAJ51394.1
Hypothetical protein.
       0.559
BAJ50621.1
Isocitrate dehydrogenase.
      0.528
BAJ50929.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
     
 0.500
BAJ51367.1
tRNA and rRNA cytosine-C5-methylases.
 
    0.485
BAJ51464.1
Nicotinate phosphoribosyltransferase.
  
  
 0.469
BAJ50465.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
     
 0.459
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.