Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rps27eSmall subunit ribosomal protein S27e. (66 aa)    
Predicted Functional Partners:
BAJ51401.1
Large subunit ribosomal protein L44e.
 
 
 0.998
BAJ50655.1
Small subunit ribosomal protein S17e.
  
 
 0.994
BAJ50311.1
Large subunit ribosomal protein L15e.
  
 
 0.993
BAJ50939.1
Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 
 0.991
rpl21e
Large subunit ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
 
 
 0.989
BAJ50299.1
Small subunit ribosomal protein S24e.
   
 
 0.989
BAJ50179.1
Large subunit ribosomal protein L18e.
  
 
 0.987
rpl31e
Large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family.
 
 
 0.981
rps6e
Small subunit ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 
 0.975
rps8e
Small subunit ribosomal protein S8e.
  
 
 0.972
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.