Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ51407.1Conserved hypothetical protein. (141 aa)    
Predicted Functional Partners:
BAJ51487.1
Small heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
    
 0.943
BAJ51387.1
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
     
  0.900
BAJ51408.1
DNA ligase 1; Belongs to the ATP-dependent DNA ligase family.
  
    0.781
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
  
 
 0.646
BAJ49883.1
Molecular chaperone GrpE; Belongs to the GrpE family.
  
 
 0.617
BAJ51183.1
Heat shock protein DnaJ-like.
  
 
 0.607
BAJ49976.1
Glutamine synthetase.
   
 
 0.580
BAJ51409.1
Hypothetical protein.
       0.578
BAJ51406.1
Peptidase M50.
  
    0.554
BAJ50706.1
Large subunit ribosomal protein L10e.
   
 
 0.456
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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