Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ51511.1Conserved hypothetical protein. (216 aa)    
Predicted Functional Partners:
BAJ50284.1
Conserved hypothetical protein; Memo-like protein; Belongs to the MEMO1 family.
    0.995
BAJ51529.1
Pyruvate formate-lyase activating enzyme.
     0.959
BAJ51512.1
Glycosyltransferase family 28.
  
    0.863
BAJ51508.1
Conserved hypothetical protein; Fibronectin-binding protein A, N-terminal.
       0.860
BAJ51510.1
Conserved hypothetical protein.
       0.860
BAJ51509.1
CBS-domain-containing protein.
  
    0.786
BAJ50157.1
Conserved hypothetical protein.
       0.700
nfo
Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
       0.700
BAJ50725.1
Pyruvate formate-lyase activating enzyme.
 
     0.630
BAJ51513.1
Conserved hypothetical protein.
       0.615
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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